Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 MIR7703-201ENST00000620784 77 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 YWHAEP7-203ENST00000622054 312 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 AC231657.1-201ENST00000624313 397 ntBASIC4.56□□□□□ -1.68
VRK3Q8IV63 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VRK3Q8IV63 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VRK3Q8IV63 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VRK3Q8IV63 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC107021.2-201ENST00000567714 2095 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 CDC27P2-201ENST00000425026 1922 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 RNU4-79P-201ENST00000362764 141 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 Y_RNA.72-201ENST00000362894 103 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 RNVU1-6-201ENST00000364688 164 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 RN7SKP106-201ENST00000410832 272 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC073264.1-201ENST00000411508 416 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 JKAMPP1-201ENST00000413804 919 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 USP9YP36-201ENST00000424581 829 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC002486.1-201ENST00000435098 391 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 CEACAMP6-201ENST00000452007 574 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 MTCO3P20-201ENST00000454926 688 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 C1DP4-201ENST00000455429 424 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 RPL21P6-201ENST00000479171 504 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 KLRA1P-201ENST00000503499 986 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC010493.1-201ENST00000513479 292 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 RNU2-46P-201ENST00000517038 113 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 HMGB1P19-201ENST00000517578 577 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC007424.1-203ENST00000554613 687 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 MIR4270-201ENST00000581799 70 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC209154.1-201ENST00000582156 337 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AP001429.1-201ENST00000602568 530 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AL391646.1-201ENST00000603860 190 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 BCRP9-201ENST00000605312 388 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AL451049.1-201ENST00000608672 497 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 MIR7973-1-201ENST00000614683 76 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC006504.8-201ENST00000621046 635 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 AC091905.1-201ENST00000624400 311 ntBASIC4.55□□□□□ -1.68
VRK3Q8IV63 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
VRK3Q8IV63 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VRK3Q8IV63 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL391684.1-202ENST00000641293 1636 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL049697.2-201ENST00000403708 294 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL603766.1-201ENST00000407763 664 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 RN7SKP267-201ENST00000410381 285 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 RN7SKP247-201ENST00000411094 308 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC234781.4-201ENST00000419384 244 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 AL035410.1-201ENST00000427409 427 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 FABP7P2-201ENST00000429946 379 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 MTCYBP6-201ENST00000441810 138 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC132479.1-201ENST00000449160 144 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.54□□□□□ -1.68
VRK3Q8IV63 SNRPGP6-201ENST00000451124 220 ntBASIC4.54□□□□□ -1.68
VRK3Q8IV63 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms