Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 MTND5P9-201ENST00000503854 1755 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 RNU1-85P-201ENST00000364127 164 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 RNY3P4-201ENST00000384428 101 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 AL023807.1-201ENST00000407932 359 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 RPS7P3-201ENST00000443360 580 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 RPL23AP64-201ENST00000469465 435 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC005840.1-201ENST00000498412 377 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 RNU6-638P-201ENST00000516582 104 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC023968.1-201ENST00000560719 475 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 SMIM12P1-201ENST00000603004 274 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC037487.3-201ENST00000606668 112 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 MIR6129-201ENST00000616087 109 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 AL445487.1-201ENST00000415694 1580 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 AL117339.4-201ENST00000608335 7063 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARS2Q5ST30 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 AC074141.1-201ENST00000588129 2995 ntBASIC6.93□□□□□ -1.3
VARS2Q5ST30 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.93□□□□□ -1.3
VARS2Q5ST30 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 MAPK10-383ENST00000642032 3390 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 CASC19-246ENST00000641625 1606 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 XIAPP3-201ENST00000312918 795 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 RPL21P75-201ENST00000396599 483 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 RPL21P28-201ENST00000401418 483 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 RN7SKP229-201ENST00000410465 302 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AL713922.1-201ENST00000416477 747 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 AL590556.1-201ENST00000423231 483 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC108479.1-201ENST00000431142 427 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 RPS26P40-201ENST00000435209 294 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 SNORD2.1-201ENST00000458762 69 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 RPL21P11-201ENST00000461458 483 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 RPL21P39-201ENST00000463605 483 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC132942.1-201ENST00000486753 483 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC093591.1-201ENST00000491435 481 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 RPL21P16-201ENST00000495531 483 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AL139099.1-201ENST00000497398 403 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 MIR4293-201ENST00000584305 78 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 RPL23AP92-201ENST00000603609 255 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 AC073349.3-201ENST00000617616 186 ntBASIC6.92□□□□□ -1.3
VARS2Q5ST30 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARS2Q5ST30 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.92□□□□□ -1.3
VARS2Q5ST30 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms