Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX2P48431 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SOX2P48431 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX2P48431 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SOX2P48431 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX2P48431 OR4G2P-201ENST00000328113 903 ntBASIC4.03□□□□□ -1.76
SOX2P48431 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SOX2P48431 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 RNU1-94P-201ENST00000362627 173 ntBASIC4.03□□□□□ -1.76
SOX2P48431 RNU6-171P-201ENST00000384354 107 ntBASIC4.03□□□□□ -1.76
SOX2P48431 HSPD1P16-201ENST00000402302 394 ntBASIC4.03□□□□□ -1.76
SOX2P48431 RPS20P2-201ENST00000402520 389 ntBASIC4.03□□□□□ -1.76
SOX2P48431 FCF1P10-201ENST00000407590 479 ntBASIC4.03□□□□□ -1.76
SOX2P48431 RN7SKP167-201ENST00000411047 285 ntBASIC4.03□□□□□ -1.76
SOX2P48431 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.03□□□□□ -1.76
SOX2P48431 CHEK2P3-201ENST00000416118 248 ntBASIC4.03□□□□□ -1.76
SOX2P48431 SPA17P1-201ENST00000416656 452 ntBASIC4.03□□□□□ -1.76
SOX2P48431 MTND1P23-201ENST00000416931 372 ntBASIC4.03□□□□□ -1.76
SOX2P48431 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.03□□□□□ -1.76
SOX2P48431 PSMA6P3-201ENST00000428242 164 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AC008065.1-201ENST00000428525 348 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.03□□□□□ -1.76
SOX2P48431 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.03□□□□□ -1.76
SOX2P48431 GAPDHP17-201ENST00000449858 1001 ntBASIC4.03□□□□□ -1.76
SOX2P48431 BX276092.4-201ENST00000452056 248 ntBASIC4.03□□□□□ -1.76
SOX2P48431 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 AC022034.3-201ENST00000471393 478 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AC022795.1-201ENST00000473808 480 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AC087385.1-201ENST00000475062 312 ntBASIC4.03□□□□□ -1.76
SOX2P48431 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.03□□□□□ -1.76
SOX2P48431 AC004924.1-201ENST00000480160 781 ntBASIC4.03□□□□□ -1.76
SOX2P48431 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 AC013356.1-201ENST00000489027 564 ntBASIC4.03□□□□□ -1.76
SOX2P48431 RPL9P6-201ENST00000492764 598 ntBASIC4.03□□□□□ -1.76
SOX2P48431 OR5M14P-201ENST00000506803 618 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AC091133.4-201ENST00000511142 308 ntBASIC4.03□□□□□ -1.76
SOX2P48431 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 RNU6-1178P-201ENST00000516674 107 ntBASIC4.03□□□□□ -1.76
SOX2P48431 RNU6-714P-201ENST00000516963 103 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AC134698.5-201ENST00000519444 336 ntBASIC4.03□□□□□ -1.76
SOX2P48431 IGLVIV-53-201ENST00000520107 367 ntBASIC4.03□□□□□ -1.76
SOX2P48431 IGLV3-26-201ENST00000520756 302 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.03□□□□□ -1.76
SOX2P48431 AC084757.1-201ENST00000559987 490 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AL157394.1-201ENST00000562983 1224 ntBASIC4.03□□□□□ -1.76
SOX2P48431 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.03□□□□□ -1.76
SOX2P48431 HMGB2P1-201ENST00000591146 634 ntBASIC4.03□□□□□ -1.76
SOX2P48431 AC011445.2-201ENST00000599274 173 ntBASIC4.03□□□□□ -1.76
SOX2P48431 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX2P48431 AC110994.2-201ENST00000635481 492 ntBASIC4.03□□□□□ -1.76
SOX2P48431 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SOX2P48431 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.03□□□□□ -1.76
SOX2P48431 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SOX2P48431 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX2P48431 AL049555.1-201ENST00000562834 1933 ntBASIC4.03□□□□□ -1.76
SOX2P48431 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.03□□□□□ -1.76
SOX2P48431 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX2P48431 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SOX2P48431 AC092447.10-201ENST00000620607 1652 ntBASIC4.03□□□□□ -1.76
SOX2P48431 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.03□□□□□ -1.76
SOX2P48431 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOX2P48431 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.02□□□□□ -1.77
SOX2P48431 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SOX2P48431 RN7SKP95-201ENST00000362860 303 ntBASIC4.02□□□□□ -1.77
SOX2P48431 RNVU1-3-201ENST00000364313 161 ntBASIC4.02□□□□□ -1.77
SOX2P48431 RNY4P34-201ENST00000364779 95 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AL356421.1-201ENST00000403255 413 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AL049697.2-201ENST00000403708 294 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AL391361.1-201ENST00000405580 489 ntBASIC4.02□□□□□ -1.77
SOX2P48431 MIR548F1-201ENST00000408667 84 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 RPL23AP25-201ENST00000430973 463 ntBASIC4.02□□□□□ -1.77
SOX2P48431 MRPS10P2-201ENST00000431226 381 ntBASIC4.02□□□□□ -1.77
SOX2P48431 RPEP2-201ENST00000432149 701 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.02□□□□□ -1.77
SOX2P48431 NPM1P49-201ENST00000448027 714 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX2P48431 AURKAPS2-201ENST00000454983 333 ntBASIC4.02□□□□□ -1.77
SOX2P48431 RPS20P32-201ENST00000456044 356 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.02□□□□□ -1.77
SOX2P48431 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.02□□□□□ -1.77
SOX2P48431 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX2P48431 AC106872.4-201ENST00000510050 523 ntBASIC4.02□□□□□ -1.77
SOX2P48431 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX2P48431 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX2P48431 AC093677.1-201ENST00000514414 678 ntBASIC4.02□□□□□ -1.77
SOX2P48431 SNORD116-26-201ENST00000516006 96 ntBASIC4.02□□□□□ -1.77
SOX2P48431 RN7SKP277-201ENST00000516895 283 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC134698.4-201ENST00000523451 826 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms