Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN6P29350 AC122134.1-202ENST00000569111 1201 ntBASIC3.51□□□□□ -1.85
PTPN6P29350 AC087499.8-201ENST00000578406 226 ntBASIC3.51□□□□□ -1.85
PTPN6P29350 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN6P29350 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.51□□□□□ -1.85
PTPN6P29350 MIR3158-1-201ENST00000583596 81 ntBASIC3.51□□□□□ -1.85
PTPN6P29350 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN6P29350 BNIP3P22-201ENST00000593399 556 ntBASIC3.51□□□□□ -1.85
PTPN6P29350 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.51□□□□□ -1.85
PTPN6P29350 AC005344.1-201ENST00000613391 459 ntBASIC3.51□□□□□ -1.85
PTPN6P29350 AL354976.1-201ENST00000613843 387 ntBASIC3.51□□□□□ -1.85
PTPN6P29350 AC006133.1-201ENST00000617106 264 ntBASIC3.51□□□□□ -1.85
PTPN6P29350 AC109454.4-201ENST00000623411 649 ntBASIC3.51□□□□□ -1.85
PTPN6P29350 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.51□□□□□ -1.85
PTPN6P29350 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN6P29350 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.51□□□□□ -1.85
PTPN6P29350 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN6P29350 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.51□□□□□ -1.85
PTPN6P29350 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN6P29350 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PTPN6P29350 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN6P29350 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN6P29350 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN6P29350 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN6P29350 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN6P29350 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PTPN6P29350 OR4A15-201ENST00000314706 1035 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 RNU6-50P-201ENST00000362356 103 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PTPN6P29350 Y_RNA.493-201ENST00000384422 102 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 RNU6-1257P-201ENST00000384625 110 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 ATP5F1P3-201ENST00000397213 657 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 RNU6ATAC-201ENST00000408749 126 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 RN7SKP156-201ENST00000410308 342 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 MTCO3P12-201ENST00000416718 547 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC127526.1-201ENST00000417526 366 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN6P29350 AL389915.1-201ENST00000422463 466 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN6P29350 AC005345.1-201ENST00000431868 217 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC007389.2-201ENST00000434630 306 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC104073.1-201ENST00000451988 151 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC010301.1-201ENST00000473936 355 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 RPS3AP50-201ENST00000487064 803 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN6P29350 SNORA67.7-201ENST00000516664 135 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN6P29350 AP006245.1-201ENST00000522549 120 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 MTCO3P15-201ENST00000526563 574 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 HIGD1AP10-201ENST00000527837 282 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AP000790.1-201ENST00000528891 737 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 OR8I1P-201ENST00000529291 931 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN6P29350 AL163642.2-201ENST00000604722 1019 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC018645.2-201ENST00000609151 472 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 VIS1.1-201ENST00000610517 203 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 MIR8058-201ENST00000615737 89 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN6P29350 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN6P29350 AL138960.2-201ENST00000625145 535 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC087821.2-201ENST00000637086 450 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN6P29350 OR8B1P-202ENST00000641132 1178 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AL365440.1-201ENST00000436135 2167 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 AC002546.1-201ENST00000588041 2504 ntBASIC3.5□□□□□ -1.85
PTPN6P29350 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN6P29350 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN6P29350 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN6P29350 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
PTPN6P29350 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN6P29350 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN6P29350 AP004289.2-201ENST00000444413 1457 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN6P29350 AC007256.1-201ENST00000392253 2765 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN6P29350 ANKRD36P1-201ENST00000344424 659 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN6P29350 RNU6-263P-201ENST00000363811 107 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.49□□□□□ -1.85
PTPN6P29350 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PTPN6P29350 RNU6-1000P-201ENST00000391066 106 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 AL583834.1-201ENST00000406943 343 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 RPL23AP47-201ENST00000408017 460 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 RNA5SP129-201ENST00000410276 118 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 AL136133.1-201ENST00000413694 376 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 RPS7P9-201ENST00000414704 586 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 HMGB3P20-201ENST00000417997 600 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN6P29350 AC006548.1-201ENST00000427470 102 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 USP9YP31-201ENST00000431405 881 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 PTGES3P1-201ENST00000439531 483 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 AC092393.1-201ENST00000439625 742 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.49□□□□□ -1.85
PTPN6P29350 RPL23AP16-201ENST00000441715 421 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.49□□□□□ -1.85
PTPN6P29350 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN6P29350 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN6P29350 TRBV26-201ENST00000456572 344 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 MTCO3P2-201ENST00000457365 171 ntBASIC3.49□□□□□ -1.85
PTPN6P29350 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms