Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CHIAP3-201ENST00000423668 1133 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 RPL18P10-201ENST00000425606 538 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AL365396.1-201ENST00000430854 671 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 MTCYBP45-201ENST00000435243 565 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ABCD3P28288 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.05□□□□□ -1.76
ABCD3P28288 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.05□□□□□ -1.76
ABCD3P28288 RPS24P6-201ENST00000452670 400 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AL121877.1-201ENST00000453704 622 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 MTCO3P16-201ENST00000454456 754 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AC133473.1-201ENST00000455173 299 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 RNU7-125P-201ENST00000458760 62 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 RN7SL98P-201ENST00000462271 300 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AC017015.1-201ENST00000477387 286 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ABCD3P28288 RPS6P4-201ENST00000494693 758 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ABCD3P28288 POU5F1P7-201ENST00000508759 541 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.05□□□□□ -1.76
ABCD3P28288 RNU6-1095P-201ENST00000516148 108 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 SNORA31.20-201ENST00000517111 133 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.05□□□□□ -1.76
ABCD3P28288 AC090151.1-201ENST00000520784 730 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AC109635.4-202ENST00000531666 412 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.05□□□□□ -1.76
ABCD3P28288 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.05□□□□□ -1.76
ABCD3P28288 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.05□□□□□ -1.76
ABCD3P28288 AC126177.3-201ENST00000551839 688 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.05□□□□□ -1.76
ABCD3P28288 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.05□□□□□ -1.76
ABCD3P28288 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.05□□□□□ -1.76
ABCD3P28288 AC141257.3-201ENST00000572906 215 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 Z98200.1-201ENST00000607298 470 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 uc_338.13-201ENST00000618243 179 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.05□□□□□ -1.76
ABCD3P28288 AC078883.4-201ENST00000623218 367 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.05□□□□□ -1.76
ABCD3P28288 PCMTD1P7-201ENST00000634506 357 ntBASIC4.05□□□□□ -1.76
ABCD3P28288 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ABCD3P28288 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
ABCD3P28288 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.05□□□□□ -1.76
ABCD3P28288 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ABCD3P28288 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ABCD3P28288 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 MIR331-201ENST00000362302 94 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 RNU6-500P-201ENST00000362349 107 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 RNU6-777P-201ENST00000364265 104 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 Y_RNA.234-201ENST00000364409 97 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 MIR1305-201ENST00000408300 86 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 RPS29P17-201ENST00000430795 166 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.04□□□□□ -1.76
ABCD3P28288 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.04□□□□□ -1.76
ABCD3P28288 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.04□□□□□ -1.76
ABCD3P28288 AC011276.1-201ENST00000469688 323 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 RN7SL41P-201ENST00000476144 297 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 RN7SL481P-201ENST00000477764 299 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 HMGB1P22-201ENST00000505315 124 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AC022447.3-201ENST00000506865 495 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.04□□□□□ -1.76
ABCD3P28288 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.04□□□□□ -1.76
ABCD3P28288 VWA8P1-201ENST00000510889 176 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AC093840.1-201ENST00000511599 336 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.04□□□□□ -1.76
ABCD3P28288 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.04□□□□□ -1.76
ABCD3P28288 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.04□□□□□ -1.76
ABCD3P28288 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 CR383656.7-201ENST00000548164 174 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ABCD3P28288 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 MIR4284-201ENST00000578924 81 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 XIAPP1-201ENST00000603162 600 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AC012669.1-201ENST00000603209 283 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AL031176.1-201ENST00000604554 466 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AC113403.1-201ENST00000604910 193 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AC122133.1-201ENST00000613964 233 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 AL713922.2-201ENST00000619384 716 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 AL356121.2-201ENST00000624715 780 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AC010608.2-201ENST00000624830 470 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ABCD3P28288 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.04□□□□□ -1.76
ABCD3P28288 AC012020.1-201ENST00000624541 1728 ntBASIC4.04□□□□□ -1.76
ABCD3P28288 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ABCD3P28288 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms