Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RPL23AP89-201ENST00000439324 255 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFAP04085 TXNP1-201ENST00000441872 371 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 GAPDHP23-201ENST00000444823 993 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 RANP2-201ENST00000456833 229 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFAP04085 RN7SL515P-201ENST00000463999 297 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 TRBV1-201ENST00000476502 284 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 PTP4A1P4-201ENST00000512479 322 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 AC009902.1-201ENST00000519351 183 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.62□□□□□ -1.51
PDGFAP04085 AP005639.1-201ENST00000526939 192 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 AC022404.1-201ENST00000555320 273 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 MIR4716-201ENST00000579628 84 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 MIR4776-2-201ENST00000580204 80 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 AF038458.1-201ENST00000588406 262 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AL670379.10-201ENST00000604330 253 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AL670379.9-201ENST00000605428 253 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AP000654.2-201ENST00000605633 586 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 SNHG22-203ENST00000617833 660 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 AL132640.3-201ENST00000630473 177 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
PDGFAP04085 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFAP04085 AC116667.2-201ENST00000641075 823 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PDGFAP04085 GUCY1B2-204ENST00000531898 1979 ntBASIC5.62□□□□□ -1.51
PDGFAP04085 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PDGFAP04085 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PDGFAP04085 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFAP04085 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFAP04085 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 AC011155.1-201ENST00000316512 456 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 RNU1-146P-201ENST00000364015 165 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFAP04085 SNORD116-11-201ENST00000383882 92 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFAP04085 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFAP04085 RPL31P12-201ENST00000422587 358 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 RPL12P34-201ENST00000424532 479 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 SKA2P1-201ENST00000425592 390 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 AC093106.2-201ENST00000428212 385 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 RPL21P112-201ENST00000434403 463 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFAP04085 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFAP04085 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.61□□□□□ -1.51
PDGFAP04085 AL359893.1-201ENST00000447628 1580 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFAP04085 SNX18P26-201ENST00000458433 740 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 RN7SL269P-201ENST00000467795 305 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 AC079140.5-201ENST00000507882 310 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 RNU6-976P-201ENST00000516086 111 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 AC103783.1-201ENST00000520506 373 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PDGFAP04085 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.61□□□□□ -1.51
PDGFAP04085 AP001922.4-201ENST00000526967 290 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 OR5D15P-201ENST00000531671 942 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 AC027026.1-201ENST00000532323 742 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
PDGFAP04085 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.61□□□□□ -1.51
PDGFAP04085 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 AC012409.4-201ENST00000612923 249 ntBASIC5.61□□□□□ -1.51
PDGFAP04085 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDGFAP04085 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDGFAP04085 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PDGFAP04085 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PDGFAP04085 SAGE2P-201ENST00000420011 2126 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFAP04085 AC097063.1-201ENST00000426714 1797 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFAP04085 AC000374.1-201ENST00000434698 1745 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms