Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCN10AQ9Y5Y9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN10AQ9Y5Y9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCN10AQ9Y5Y9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 SEC1P-202ENST00000473944 940 ntBASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 AC092597.1-201ENST00000487352 616 ntBASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCN10AQ9Y5Y9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 SDHAP1-207ENST00000440850 2000 ntBASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN10AQ9Y5Y9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 AC092667.1-201ENST00000434301 2586 ntBASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 TPM4P1-201ENST00000436100 807 ntBASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 AC034232.1-201ENST00000506026 1064 ntBASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms