Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX11Q9Y5W9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 AP000550.4-202ENST00000639755 178 ntBASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX11Q9Y5W9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX11Q9Y5W9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 AL512604.3-201ENST00000569583 964 ntBASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 AC140113.3-201ENST00000605663 199 ntBASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 AL031432.5-201ENST00000641059 760 ntBASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNX11Q9Y5W9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.02■□□□□ 0.63
SNX11Q9Y5W9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX11Q9Y5W9 AP001271.2-201ENST00000624018 1556 ntBASIC19.02■□□□□ 0.63
SNX11Q9Y5W9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 PCED1CP-201ENST00000419887 785 ntBASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 KRT18P56-201ENST00000507275 550 ntBASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 FAM86EP-206ENST00000510506 987 ntBASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 AL023973.1-201ENST00000624619 620 ntBASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX11Q9Y5W9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms