Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 KSR1P1-201ENST00000446298 240 ntBASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 AL353708.3-201ENST00000610272 989 ntBASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 LINC01465-201ENST00000408887 1940 ntBASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.62■□□□□ 0.41
RPH3AQ9Y2J0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 AL355355.2-201ENST00000442321 338 ntBASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 HLA-A-209ENST00000638375 975 ntBASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 KRT16P1-201ENST00000399124 1418 ntBASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.61■□□□□ 0.41
RPH3AQ9Y2J0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 MIR4785-201ENST00000585005 73 ntBASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 AC026471.5-201ENST00000615068 467 ntBASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 TREX1-205ENST00000625293 1783 ntBASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RPH3AQ9Y2J0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms