Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.63■□□□□ 0.73
FNDC3AQ9Y2H6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 AL390955.1-201ENST00000428694 934 ntBASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 KRT18P57-201ENST00000443599 1254 ntBASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC3AQ9Y2H6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 LINC01568-207ENST00000641790 1380 ntBASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 AC113347.1-201ENST00000413321 391 ntBASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC3AQ9Y2H6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 CYP2D8P-201ENST00000433633 1490 ntBASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNDC3AQ9Y2H6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNDC3AQ9Y2H6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms