Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HHLA3Q9XRX5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 ID1-201ENST00000376105 1233 ntBASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AC069152.1-201ENST00000438030 544 ntBASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HHLA3Q9XRX5 NOC2LP2-201ENST00000407594 1944 ntBASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 AL355802.2-201ENST00000402069 882 ntBASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 AC142086.2-201ENST00000569753 217 ntBASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 AC005829.2-201ENST00000571422 1056 ntBASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 MYC-209ENST00000641252 345 ntBASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HHLA3Q9XRX5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms