Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COPS3Q9UNS2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.11■□□□□ 0.33
COPS3Q9UNS2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 DUSP5P2-201ENST00000426873 1033 ntBASIC17.11■□□□□ 0.33
COPS3Q9UNS2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 AC009113.1-201ENST00000570267 2443 ntBASIC17.11■□□□□ 0.33
COPS3Q9UNS2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 AC007613.1-201ENST00000572811 2597 ntBASIC17.11■□□□□ 0.33
COPS3Q9UNS2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS3Q9UNS2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 MIPEPP3-201ENST00000412105 444 ntBASIC17.1■□□□□ 0.33
COPS3Q9UNS2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 RPS2P52-201ENST00000469610 820 ntBASIC17.1■□□□□ 0.33
COPS3Q9UNS2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 RAP2CP1-201ENST00000605103 478 ntBASIC17.1■□□□□ 0.33
COPS3Q9UNS2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPS3Q9UNS2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 CROCCP5-201ENST00000436658 830 ntBASIC17.09■□□□□ 0.33
COPS3Q9UNS2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms