Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 AL049597.2-201ENST00000565575 961 ntBASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 AC131212.4-201ENST00000623606 975 ntBASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 AC009237.14-201ENST00000609975 1594 ntBASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NPIPA1Q9UND3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AC113347.1-201ENST00000413321 391 ntBASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 KRT18P57-201ENST00000443599 1254 ntBASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AC026271.3-201ENST00000571884 352 ntBASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AL445228.2-201ENST00000605589 952 ntBASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPA1Q9UND3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 MESTP1-201ENST00000404287 994 ntBASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 AL137013.1-201ENST00000432946 1228 ntBASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 AC011506.1-201ENST00000474329 610 ntBASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPA1Q9UND3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.71■□□□□ 0.42
NPIPA1Q9UND3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 ARMC10P1-201ENST00000313754 855 ntBASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 AC004980.1-204ENST00000429707 299 ntBASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPA1Q9UND3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms