Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH9Q9ULB4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.34■□□□□ 0.85
CDH9Q9ULB4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 SLC25A1P2-201ENST00000430693 912 ntBASIC20.34■□□□□ 0.85
CDH9Q9ULB4 AC128688.1-201ENST00000487626 519 ntBASIC20.34■□□□□ 0.85
CDH9Q9ULB4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH9Q9ULB4 AL158211.5-201ENST00000623583 2518 ntBASIC20.33■□□□□ 0.85
CDH9Q9ULB4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 TSPY23P-201ENST00000440136 739 ntBASIC20.33■□□□□ 0.85
CDH9Q9ULB4 CA15P1-201ENST00000481698 905 ntBASIC20.33■□□□□ 0.85
CDH9Q9ULB4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH9Q9ULB4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 AFG3L1P-217ENST00000557444 2447 ntBASIC20.33■□□□□ 0.84
CDH9Q9ULB4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.33■□□□□ 0.84
CDH9Q9ULB4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 CCR12P-201ENST00000446203 998 ntBASIC20.32■□□□□ 0.84
CDH9Q9ULB4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 AC005363.2-201ENST00000618631 242 ntBASIC20.32■□□□□ 0.84
CDH9Q9ULB4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 AC116562.4-202ENST00000641738 218 ntBASIC20.32■□□□□ 0.84
CDH9Q9ULB4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDH9Q9ULB4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 Z82202.1-201ENST00000623446 1880 ntBASIC20.31■□□□□ 0.84
CDH9Q9ULB4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDH9Q9ULB4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms