Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF2IRD1Q9UHL9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF2IRD1Q9UHL9 AC104417.2-201ENST00000562989 1793 ntBASIC21.18■□□□□ 0.98
GTF2IRD1Q9UHL9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GTF2IRD1Q9UHL9 LINC01006-201ENST00000333319 2292 ntBASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 STARP1-201ENST00000397973 869 ntBASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 GCSHP2-201ENST00000560971 527 ntBASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 AL136038.3-201ENST00000561909 1096 ntBASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF2IRD1Q9UHL9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 AC083849.1-201ENST00000615227 514 ntBASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 AC093458.2-201ENST00000623150 629 ntBASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.16■□□□□ 0.98
GTF2IRD1Q9UHL9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 VENTXP5-201ENST00000523979 775 ntBASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 KRT126P-201ENST00000549467 1181 ntBASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 HYMAI.1-201ENST00000620949 238 ntBASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GTF2IRD1Q9UHL9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.14■□□□□ 0.98
GTF2IRD1Q9UHL9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
GTF2IRD1Q9UHL9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GTF2IRD1Q9UHL9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.14■□□□□ 0.98
GTF2IRD1Q9UHL9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GTF2IRD1Q9UHL9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.14■□□□□ 0.98
GTF2IRD1Q9UHL9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GTF2IRD1Q9UHL9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 KRT18P48-201ENST00000434763 852 ntBASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 ZNF444P1-201ENST00000559497 298 ntBASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 AC099778.1-201ENST00000568593 1911 ntBASIC21.14■□□□□ 0.97
GTF2IRD1Q9UHL9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF2IRD1Q9UHL9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms