Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.1■□□□□ 0.49
CTSFQ9UBX1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 MIR1224-201ENST00000408193 85 ntBASIC18.1■□□□□ 0.49
CTSFQ9UBX1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 KRT18P57-201ENST00000443599 1254 ntBASIC18.1■□□□□ 0.49
CTSFQ9UBX1 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.1■□□□□ 0.49
CTSFQ9UBX1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 AC125437.2-201ENST00000625180 2167 ntBASIC18.09■□□□□ 0.49
CTSFQ9UBX1 TERF1P1-201ENST00000311003 1181 ntBASIC18.09■□□□□ 0.49
CTSFQ9UBX1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSFQ9UBX1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 SDHAP1-207ENST00000440850 2000 ntBASIC18.08■□□□□ 0.49
CTSFQ9UBX1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.08■□□□□ 0.49
CTSFQ9UBX1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 FAM87A-204ENST00000613235 858 ntBASIC18.08■□□□□ 0.48
CTSFQ9UBX1 AC092865.7-201ENST00000641832 219 ntBASIC18.08■□□□□ 0.48
CTSFQ9UBX1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSFQ9UBX1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 AL137013.1-201ENST00000432946 1228 ntBASIC18.07■□□□□ 0.48
CTSFQ9UBX1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 CKBP1-201ENST00000565489 1086 ntBASIC18.07■□□□□ 0.48
CTSFQ9UBX1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 AC010331.1-201ENST00000611423 582 ntBASIC18.07■□□□□ 0.48
CTSFQ9UBX1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSFQ9UBX1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 KRT8P11-201ENST00000409686 1436 ntBASIC18.06■□□□□ 0.48
CTSFQ9UBX1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTSFQ9UBX1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms