Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PMS2P1-201ENST00000431037 1228 ntBASIC20.43■□□□□ 0.86
CHD7Q9P2D1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 NUS1P1-201ENST00000446295 882 ntBASIC20.43■□□□□ 0.86
CHD7Q9P2D1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 TPSP2-201ENST00000561760 610 ntBASIC20.43■□□□□ 0.86
CHD7Q9P2D1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 LINC00167-201ENST00000530583 1419 ntBASIC20.43■□□□□ 0.86
CHD7Q9P2D1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 BX640515.1-201ENST00000617215 977 ntBASIC20.43■□□□□ 0.86
CHD7Q9P2D1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 AC093525.10-201ENST00000625130 1569 ntBASIC20.42■□□□□ 0.86
CHD7Q9P2D1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD7Q9P2D1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD7Q9P2D1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 SLC25A1P1-201ENST00000528351 927 ntBASIC20.4■□□□□ 0.86
CHD7Q9P2D1 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 AP001271.2-201ENST00000624018 1556 ntBASIC20.4■□□□□ 0.86
CHD7Q9P2D1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 MIR574-201ENST00000385209 96 ntBASIC20.4■□□□□ 0.86
CHD7Q9P2D1 HMGN1P19-201ENST00000436976 333 ntBASIC20.4■□□□□ 0.86
CHD7Q9P2D1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD7Q9P2D1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
CHD7Q9P2D1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD7Q9P2D1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.39■□□□□ 0.86
CHD7Q9P2D1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 SEC1P-202ENST00000473944 940 ntBASIC20.39■□□□□ 0.85
CHD7Q9P2D1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.39■□□□□ 0.85
CHD7Q9P2D1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms