Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.55■□□□□ 0.4
CLN6Q9NWW5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLN6Q9NWW5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 PKD1P1-201ENST00000458669 6805 ntBASIC17.54■□□□□ 0.4
CLN6Q9NWW5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 AC018553.1-201ENST00000616682 1458 ntBASIC17.54■□□□□ 0.4
CLN6Q9NWW5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLN6Q9NWW5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 ZNF815P-204ENST00000434898 1737 ntBASIC17.53■□□□□ 0.4
CLN6Q9NWW5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 BICD1-207ENST00000551848 1962 ntBASIC17.53■□□□□ 0.4
CLN6Q9NWW5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLN6Q9NWW5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 FP475955.4-201ENST00000623131 1990 ntBASIC17.52■□□□□ 0.4
CLN6Q9NWW5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLN6Q9NWW5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLN6Q9NWW5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.52■□□□□ 0.39
CLN6Q9NWW5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLN6Q9NWW5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLN6Q9NWW5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.52■□□□□ 0.39
CLN6Q9NWW5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLN6Q9NWW5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.52■□□□□ 0.39
CLN6Q9NWW5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms