Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.42■■□□□ 1.18
SH2D4AQ9H788 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SH2D4AQ9H788 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.42■■□□□ 1.18
SH2D4AQ9H788 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 AC022616.7-201ENST00000525383 220 ntBASIC22.41■■□□□ 1.18
SH2D4AQ9H788 AC087388.1-201ENST00000571370 1112 ntBASIC22.41■■□□□ 1.18
SH2D4AQ9H788 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SH2D4AQ9H788 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 AC117947.1-201ENST00000427448 529 ntBASIC22.4■■□□□ 1.18
SH2D4AQ9H788 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 COX11P1-201ENST00000489116 835 ntBASIC22.4■■□□□ 1.18
SH2D4AQ9H788 AC063952.2-201ENST00000498792 1227 ntBASIC22.4■■□□□ 1.18
SH2D4AQ9H788 WWOX-216ENST00000569818 525 ntBASIC22.4■■□□□ 1.18
SH2D4AQ9H788 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 AC141257.4-201ENST00000634557 245 ntBASIC22.4■■□□□ 1.18
SH2D4AQ9H788 AC136944.6-201ENST00000634818 245 ntBASIC22.4■■□□□ 1.18
SH2D4AQ9H788 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH2D4AQ9H788 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.18
SH2D4AQ9H788 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 RNF152P1-201ENST00000397754 604 ntBASIC22.39■■□□□ 1.17
SH2D4AQ9H788 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 AC139887.4-201ENST00000607877 719 ntBASIC22.39■■□□□ 1.17
SH2D4AQ9H788 AL031432.5-201ENST00000641059 760 ntBASIC22.39■■□□□ 1.17
SH2D4AQ9H788 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 ZNF815P-204ENST00000434898 1737 ntBASIC22.39■■□□□ 1.17
SH2D4AQ9H788 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
SH2D4AQ9H788 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 AP003041.3-201ENST00000527151 707 ntBASIC22.38■■□□□ 1.17
SH2D4AQ9H788 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 AC104417.2-201ENST00000562989 1793 ntBASIC22.38■■□□□ 1.17
SH2D4AQ9H788 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
SH2D4AQ9H788 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SH2D4AQ9H788 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.37■■□□□ 1.17
SH2D4AQ9H788 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SH2D4AQ9H788 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms