Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.35■□□□□ 0.53
PIF1Q9H611 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PIF1Q9H611 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PIF1Q9H611 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.35■□□□□ 0.53
PIF1Q9H611 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.35■□□□□ 0.53
PIF1Q9H611 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.35■□□□□ 0.53
PIF1Q9H611 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.35■□□□□ 0.53
PIF1Q9H611 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 AC026185.1-201ENST00000445748 174 ntBASIC18.35■□□□□ 0.53
PIF1Q9H611 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.35■□□□□ 0.53
PIF1Q9H611 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.35■□□□□ 0.53
PIF1Q9H611 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.35■□□□□ 0.53
PIF1Q9H611 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.35■□□□□ 0.53
PIF1Q9H611 AC073111.5-205ENST00000641717 521 ntBASIC18.35■□□□□ 0.53
PIF1Q9H611 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PIF1Q9H611 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PIF1Q9H611 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.35■□□□□ 0.53
PIF1Q9H611 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PIF1Q9H611 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PIF1Q9H611 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.34■□□□□ 0.53
PIF1Q9H611 CDCA4P2-201ENST00000441182 718 ntBASIC18.34■□□□□ 0.53
PIF1Q9H611 AC093787.1-201ENST00000450396 207 ntBASIC18.34■□□□□ 0.53
PIF1Q9H611 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.34■□□□□ 0.53
PIF1Q9H611 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.34■□□□□ 0.53
PIF1Q9H611 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.34■□□□□ 0.53
PIF1Q9H611 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PIF1Q9H611 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PIF1Q9H611 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PIF1Q9H611 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PIF1Q9H611 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.33■□□□□ 0.53
PIF1Q9H611 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PIF1Q9H611 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PIF1Q9H611 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
PIF1Q9H611 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PIF1Q9H611 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PIF1Q9H611 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PIF1Q9H611 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PIF1Q9H611 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PIF1Q9H611 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PIF1Q9H611 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.33■□□□□ 0.52
PIF1Q9H611 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PIF1Q9H611 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.33■□□□□ 0.52
PIF1Q9H611 RAP2CP1-201ENST00000605103 478 ntBASIC18.33■□□□□ 0.52
PIF1Q9H611 OR10C1-204ENST00000622521 1039 ntBASIC18.33■□□□□ 0.52
PIF1Q9H611 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.33■□□□□ 0.52
PIF1Q9H611 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PIF1Q9H611 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PIF1Q9H611 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
PIF1Q9H611 AC116351.2-201ENST00000606540 1585 ntBASIC18.33■□□□□ 0.52
PIF1Q9H611 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PIF1Q9H611 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.33■□□□□ 0.52
PIF1Q9H611 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PIF1Q9H611 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PIF1Q9H611 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PIF1Q9H611 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.32■□□□□ 0.52
PIF1Q9H611 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PIF1Q9H611 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
PIF1Q9H611 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PIF1Q9H611 AL512625.2-201ENST00000417533 625 ntBASIC18.32■□□□□ 0.52
PIF1Q9H611 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.32■□□□□ 0.52
PIF1Q9H611 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.32■□□□□ 0.52
PIF1Q9H611 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.32■□□□□ 0.52
PIF1Q9H611 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.32■□□□□ 0.52
PIF1Q9H611 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PIF1Q9H611 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PIF1Q9H611 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.32■□□□□ 0.52
PIF1Q9H611 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PIF1Q9H611 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms