Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.7■■□□□ 1.22
RNF41Q9H4P4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF41Q9H4P4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 PRSS44-201ENST00000515154 1146 ntBASIC22.69■■□□□ 1.22
RNF41Q9H4P4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
RNF41Q9H4P4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AC079598.2-202ENST00000546624 1451 ntBASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AC096733.2-201ENST00000609937 1394 ntBASIC22.68■■□□□ 1.22
RNF41Q9H4P4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 TSPY15P-201ENST00000457163 923 ntBASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AC097488.1-201ENST00000507834 756 ntBASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AP000525.1-201ENST00000608286 694 ntBASIC22.68■■□□□ 1.22
RNF41Q9H4P4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RNF41Q9H4P4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 SLC25A1P4-201ENST00000567977 778 ntBASIC22.67■■□□□ 1.22
RNF41Q9H4P4 AP005242.2-201ENST00000580065 1175 ntBASIC22.67■■□□□ 1.22
RNF41Q9H4P4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF41Q9H4P4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 KRT8P11-201ENST00000409686 1436 ntBASIC22.66■■□□□ 1.22
RNF41Q9H4P4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 TSPY23P-201ENST00000440136 739 ntBASIC22.66■■□□□ 1.22
RNF41Q9H4P4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 BX088651.1-201ENST00000540551 451 ntBASIC22.66■■□□□ 1.22
RNF41Q9H4P4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 FITM1-202ENST00000559294 800 ntBASIC22.66■■□□□ 1.22
RNF41Q9H4P4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 AL032819.2-201ENST00000624543 2162 ntBASIC22.66■■□□□ 1.22
RNF41Q9H4P4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF41Q9H4P4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms