Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2OQ9C0C9 AL121672.3-201ENST00000608644 468 ntBASIC21.19■□□□□ 0.98
UBE2OQ9C0C9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.19■□□□□ 0.98
UBE2OQ9C0C9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2OQ9C0C9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2OQ9C0C9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBE2OQ9C0C9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UBE2OQ9C0C9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.18■□□□□ 0.98
UBE2OQ9C0C9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 AC079781.3-201ENST00000449110 356 ntBASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 AC117500.6-201ENST00000624871 588 ntBASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
UBE2OQ9C0C9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 HBZP1-201ENST00000354915 429 ntBASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 KRT18P13-201ENST00000400056 1290 ntBASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBE2OQ9C0C9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 AC016734.2-201ENST00000624325 1377 ntBASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 AC011498.5-201ENST00000592027 486 ntBASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 AL732292.2-201ENST00000609649 430 ntBASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 AC006128.1-201ENST00000624704 1661 ntBASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBE2OQ9C0C9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBE2OQ9C0C9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
UBE2OQ9C0C9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBE2OQ9C0C9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
UBE2OQ9C0C9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms