Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.83■□□□□ 0.76
FOXP3Q9BZS1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 AL359736.2-201ENST00000621992 437 ntBASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FOXP3Q9BZS1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 AL049812.1-201ENST00000432563 2267 ntBASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 AC008550.1-201ENST00000511500 884 ntBASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXP3Q9BZS1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 AL031598.1-201ENST00000561511 1773 ntBASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 Z98044.1-201ENST00000632503 1764 ntBASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 C1QBPP2-201ENST00000528754 825 ntBASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 FAM197Y4-202ENST00000622692 608 ntBASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXP3Q9BZS1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXP3Q9BZS1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXP3Q9BZS1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXP3Q9BZS1 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXP3Q9BZS1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXP3Q9BZS1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms