Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC94Q9BW85 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 AC239809.2-201ENST00000415381 517 ntBASIC21.71■■□□□ 1.07
CCDC94Q9BW85 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 AL023875.1-201ENST00000640777 796 ntBASIC21.71■■□□□ 1.07
CCDC94Q9BW85 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CCDC94Q9BW85 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
CCDC94Q9BW85 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CCDC94Q9BW85 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 AL121829.2-201ENST00000620908 328 ntBASIC21.7■■□□□ 1.06
CCDC94Q9BW85 AL121906.2-201ENST00000621597 723 ntBASIC21.7■■□□□ 1.06
CCDC94Q9BW85 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 AC124283.5-201ENST00000624661 1809 ntBASIC21.7■■□□□ 1.06
CCDC94Q9BW85 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC94Q9BW85 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 AC093827.2-201ENST00000512654 315 ntBASIC21.69■■□□□ 1.06
CCDC94Q9BW85 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC94Q9BW85 AC106820.2-201ENST00000563775 3264 ntBASIC21.68■■□□□ 1.06
CCDC94Q9BW85 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC94Q9BW85 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC94Q9BW85 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC94Q9BW85 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms