Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 Z85996.1-201ENST00000494644 937 ntBASIC18.36■□□□□ 0.53
NDC1Q9BTX1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 AP000692.2-201ENST00000608391 879 ntBASIC18.36■□□□□ 0.53
NDC1Q9BTX1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 KRT8P9-201ENST00000558927 1449 ntBASIC18.35■□□□□ 0.53
NDC1Q9BTX1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 C2orf69P3-201ENST00000565542 1120 ntBASIC18.35■□□□□ 0.53
NDC1Q9BTX1 AP005242.2-201ENST00000580065 1175 ntBASIC18.35■□□□□ 0.53
NDC1Q9BTX1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 LINC01465-201ENST00000408887 1940 ntBASIC18.35■□□□□ 0.53
NDC1Q9BTX1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDC1Q9BTX1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 LINC01568-207ENST00000641790 1380 ntBASIC18.34■□□□□ 0.53
NDC1Q9BTX1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 AC012306.2-201ENST00000609350 630 ntBASIC18.34■□□□□ 0.53
NDC1Q9BTX1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NDC1Q9BTX1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDC1Q9BTX1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 AC091390.4-202ENST00000476426 537 ntBASIC18.33■□□□□ 0.52
NDC1Q9BTX1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 AC145285.6-201ENST00000604632 637 ntBASIC18.33■□□□□ 0.52
NDC1Q9BTX1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NDC1Q9BTX1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms