Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM47Q9BQJ4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 RCN1P1-201ENST00000400413 996 ntBASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 ECEL1P2-202ENST00000465689 757 ntBASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEM47Q9BQJ4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 AL023803.3-201ENST00000615559 522 ntBASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM47Q9BQJ4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 SLC25A1P2-201ENST00000430693 912 ntBASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 FAM210CP-201ENST00000445714 574 ntBASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 KRT18P21-201ENST00000515767 1272 ntBASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TMEM47Q9BQJ4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 TSPY21P-201ENST00000433481 731 ntBASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 FAM87A-204ENST00000613235 858 ntBASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 AC005363.2-201ENST00000618631 242 ntBASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM47Q9BQJ4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 SLC25A3P1-201ENST00000443844 931 ntBASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.34■■□□□ 1.17
TMEM47Q9BQJ4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM47Q9BQJ4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM47Q9BQJ4 AC092338.2-201ENST00000568827 1415 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms