Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.79■□□□□ 0.6
NPAS2Q99743 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
NPAS2Q99743 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 RPS2P52-201ENST00000469610 820 ntBASIC18.79■□□□□ 0.6
NPAS2Q99743 UNC93B4-201ENST00000505679 747 ntBASIC18.79■□□□□ 0.6
NPAS2Q99743 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.79■□□□□ 0.6
NPAS2Q99743 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS2Q99743 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.79■□□□□ 0.6
NPAS2Q99743 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS2Q99743 AC009113.1-201ENST00000570267 2443 ntBASIC18.79■□□□□ 0.6
NPAS2Q99743 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NPAS2Q99743 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.78■□□□□ 0.6
NPAS2Q99743 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NPAS2Q99743 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NPAS2Q99743 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NPAS2Q99743 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS2Q99743 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS2Q99743 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS2Q99743 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NPAS2Q99743 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NPAS2Q99743 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS2Q99743 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
NPAS2Q99743 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.78■□□□□ 0.6
NPAS2Q99743 PHGDH-210ENST00000641115 1638 ntBASIC18.78■□□□□ 0.6
NPAS2Q99743 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NPAS2Q99743 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS2Q99743 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS2Q99743 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NPAS2Q99743 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NPAS2Q99743 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NPAS2Q99743 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
NPAS2Q99743 AC005332.8-201ENST00000622750 2735 ntBASIC18.77■□□□□ 0.6
NPAS2Q99743 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NPAS2Q99743 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NPAS2Q99743 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS2Q99743 SOX15-203ENST00000570788 1093 ntBASIC18.77■□□□□ 0.6
NPAS2Q99743 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS2Q99743 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NPAS2Q99743 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
NPAS2Q99743 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS2Q99743 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NPAS2Q99743 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS2Q99743 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
NPAS2Q99743 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS2Q99743 AC006333.2-201ENST00000607957 2099 ntBASIC18.77■□□□□ 0.59
NPAS2Q99743 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS2Q99743 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS2Q99743 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS2Q99743 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NPAS2Q99743 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS2Q99743 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NPAS2Q99743 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS2Q99743 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS2Q99743 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS2Q99743 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS2Q99743 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS2Q99743 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS2Q99743 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS2Q99743 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS2Q99743 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS2Q99743 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS2Q99743 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NPAS2Q99743 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms