Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 AC005363.2-201ENST00000618631 242 ntBASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDK5RAP1Q96SZ6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 TSPY17P-201ENST00000450329 467 ntBASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDK5RAP1Q96SZ6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
CDK5RAP1Q96SZ6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDK5RAP1Q96SZ6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 SDHAP1-207ENST00000440850 2000 ntBASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 FAM210CP-201ENST00000445714 574 ntBASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 AC010653.2-201ENST00000623505 997 ntBASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
CDK5RAP1Q96SZ6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 AC113347.1-201ENST00000413321 391 ntBASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms