Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 KRT8P8-201ENST00000434750 1448 ntBASIC15.65■□□□□ 0.1
ZNF48Q96MX3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF48Q96MX3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
ZNF48Q96MX3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 AC096733.2-201ENST00000609937 1394 ntBASIC15.64■□□□□ 0.09
ZNF48Q96MX3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF48Q96MX3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 AC112907.3-201ENST00000577781 2400 ntBASIC15.63■□□□□ 0.09
ZNF48Q96MX3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 AC087388.1-201ENST00000571370 1112 ntBASIC15.63■□□□□ 0.09
ZNF48Q96MX3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ZNF48Q96MX3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
ZNF48Q96MX3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF48Q96MX3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF48Q96MX3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ZNF48Q96MX3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ZNF48Q96MX3 LINC01465-201ENST00000408887 1940 ntBASIC15.61■□□□□ 0.09
ZNF48Q96MX3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ZNF48Q96MX3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF48Q96MX3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ZNF48Q96MX3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF48Q96MX3 HMGA1P5-201ENST00000412453 271 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms