Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS50Q96JG6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS50Q96JG6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 AC110285.5-201ENST00000611501 352 ntBASIC18.78■□□□□ 0.6
VPS50Q96JG6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 NEFHP1-201ENST00000412845 2629 ntBASIC18.78■□□□□ 0.6
VPS50Q96JG6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS50Q96JG6 TREX1-205ENST00000625293 1783 ntBASIC18.78■□□□□ 0.6
VPS50Q96JG6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS50Q96JG6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 AC093503.3-201ENST00000624917 2352 ntBASIC18.77■□□□□ 0.6
VPS50Q96JG6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 AL121829.2-201ENST00000620908 328 ntBASIC18.77■□□□□ 0.6
VPS50Q96JG6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VPS50Q96JG6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS50Q96JG6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS50Q96JG6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.77■□□□□ 0.59
VPS50Q96JG6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS50Q96JG6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.77■□□□□ 0.59
VPS50Q96JG6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS50Q96JG6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.76■□□□□ 0.59
VPS50Q96JG6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS50Q96JG6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS50Q96JG6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms