Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHDQ96IW2 UNC93B7-201ENST00000509439 705 ntBASIC19.42■□□□□ 0.7
SHDQ96IW2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.42■□□□□ 0.7
SHDQ96IW2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHDQ96IW2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHDQ96IW2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
SHDQ96IW2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHDQ96IW2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SHDQ96IW2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SHDQ96IW2 AF106564.1-201ENST00000607058 2553 ntBASIC19.41■□□□□ 0.7
SHDQ96IW2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHDQ96IW2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.41■□□□□ 0.7
SHDQ96IW2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.41■□□□□ 0.7
SHDQ96IW2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.41■□□□□ 0.7
SHDQ96IW2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.41■□□□□ 0.7
SHDQ96IW2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHDQ96IW2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHDQ96IW2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.41■□□□□ 0.7
SHDQ96IW2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.41■□□□□ 0.7
SHDQ96IW2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.41■□□□□ 0.7
SHDQ96IW2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SHDQ96IW2 AP002414.4-201ENST00000589764 1148 ntBASIC19.41■□□□□ 0.7
SHDQ96IW2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHDQ96IW2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SHDQ96IW2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHDQ96IW2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHDQ96IW2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHDQ96IW2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHDQ96IW2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.41■□□□□ 0.7
SHDQ96IW2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHDQ96IW2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.4■□□□□ 0.7
SHDQ96IW2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SHDQ96IW2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHDQ96IW2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHDQ96IW2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHDQ96IW2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHDQ96IW2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHDQ96IW2 CHCHD2P8-201ENST00000429873 447 ntBASIC19.4■□□□□ 0.7
SHDQ96IW2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SHDQ96IW2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.4■□□□□ 0.7
SHDQ96IW2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.4■□□□□ 0.7
SHDQ96IW2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.4■□□□□ 0.7
SHDQ96IW2 IFNL4P1-201ENST00000607083 540 ntBASIC19.4■□□□□ 0.7
SHDQ96IW2 AL121772.3-201ENST00000610840 674 ntBASIC19.4■□□□□ 0.7
SHDQ96IW2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.4■□□□□ 0.7
SHDQ96IW2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.4■□□□□ 0.7
SHDQ96IW2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SHDQ96IW2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHDQ96IW2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHDQ96IW2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.4■□□□□ 0.7
SHDQ96IW2 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.4■□□□□ 0.7
SHDQ96IW2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SHDQ96IW2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.4■□□□□ 0.7
SHDQ96IW2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHDQ96IW2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHDQ96IW2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHDQ96IW2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHDQ96IW2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHDQ96IW2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SHDQ96IW2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.39■□□□□ 0.69
SHDQ96IW2 AP000347.1-202ENST00000435868 847 ntBASIC19.39■□□□□ 0.69
SHDQ96IW2 AP002383.4-201ENST00000442518 975 ntBASIC19.39■□□□□ 0.69
SHDQ96IW2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.39■□□□□ 0.69
SHDQ96IW2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.39■□□□□ 0.69
SHDQ96IW2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.39■□□□□ 0.69
SHDQ96IW2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.39■□□□□ 0.69
SHDQ96IW2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.39■□□□□ 0.69
SHDQ96IW2 AC024243.1-201ENST00000609234 778 ntBASIC19.39■□□□□ 0.69
SHDQ96IW2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.39■□□□□ 0.69
SHDQ96IW2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.39■□□□□ 0.69
SHDQ96IW2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.39■□□□□ 0.69
SHDQ96IW2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.39■□□□□ 0.69
SHDQ96IW2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SHDQ96IW2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SHDQ96IW2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHDQ96IW2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SHDQ96IW2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SHDQ96IW2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHDQ96IW2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms