Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM3Q8TF72 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 RPS2P55-201ENST00000397318 883 ntBASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 AC107956.1-201ENST00000494359 873 ntBASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 AL445675.2-201ENST00000620291 557 ntBASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHROOM3Q8TF72 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 AC141586.3-201ENST00000562166 1838 ntBASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 AC026271.3-201ENST00000571884 352 ntBASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 REXO1L10P-201ENST00000615707 1290 ntBASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHROOM3Q8TF72 RCC2P6-201ENST00000526625 1557 ntBASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 TSPY23P-201ENST00000440136 739 ntBASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 CD177P1-201ENST00000606252 935 ntBASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHROOM3Q8TF72 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 AC011506.1-201ENST00000474329 610 ntBASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHROOM3Q8TF72 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 AC087499.1-201ENST00000418141 1075 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms