Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD6Q8TD26 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 KRT8P20-201ENST00000423953 1409 ntBASIC17.4■□□□□ 0.38
CHD6Q8TD26 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD6Q8TD26 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.4■□□□□ 0.38
CHD6Q8TD26 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD6Q8TD26 AC020928.2-201ENST00000588717 2197 ntBASIC17.4■□□□□ 0.38
CHD6Q8TD26 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.4■□□□□ 0.38
CHD6Q8TD26 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.4■□□□□ 0.38
CHD6Q8TD26 AC087641.1-201ENST00000557561 1021 ntBASIC17.4■□□□□ 0.38
CHD6Q8TD26 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.4■□□□□ 0.38
CHD6Q8TD26 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CHD6Q8TD26 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHD6Q8TD26 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.39■□□□□ 0.38
CHD6Q8TD26 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHD6Q8TD26 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 MIR4674-201ENST00000582457 87 ntBASIC17.39■□□□□ 0.37
CHD6Q8TD26 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHD6Q8TD26 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.39■□□□□ 0.37
CHD6Q8TD26 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 AC024243.1-201ENST00000609234 778 ntBASIC17.38■□□□□ 0.37
CHD6Q8TD26 AL157888.1-201ENST00000631930 593 ntBASIC17.38■□□□□ 0.37
CHD6Q8TD26 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHD6Q8TD26 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.38■□□□□ 0.37
CHD6Q8TD26 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 AC009533.2-201ENST00000543664 586 ntBASIC17.37■□□□□ 0.37
CHD6Q8TD26 BNIP3P18-201ENST00000593976 575 ntBASIC17.37■□□□□ 0.37
CHD6Q8TD26 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 LINC01465-201ENST00000408887 1940 ntBASIC17.37■□□□□ 0.37
CHD6Q8TD26 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 AC011484.1-201ENST00000377652 1995 ntBASIC17.37■□□□□ 0.37
CHD6Q8TD26 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHD6Q8TD26 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms