Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 AC010947.1-201ENST00000623454 693 ntBASIC20.7■□□□□ 0.9
BEST2Q8NFU1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 LINC01568-207ENST00000641790 1380 ntBASIC20.7■□□□□ 0.9
BEST2Q8NFU1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 KRT18P21-201ENST00000515767 1272 ntBASIC20.69■□□□□ 0.9
BEST2Q8NFU1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST2Q8NFU1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 PRSS44-201ENST00000515154 1146 ntBASIC20.68■□□□□ 0.9
BEST2Q8NFU1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 CKBP1-201ENST00000565489 1086 ntBASIC20.68■□□□□ 0.9
BEST2Q8NFU1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 KRT8P11-201ENST00000409686 1436 ntBASIC20.68■□□□□ 0.9
BEST2Q8NFU1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.68■□□□□ 0.9
BEST2Q8NFU1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST2Q8NFU1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 TSPY14P-201ENST00000303979 915 ntBASIC20.66■□□□□ 0.9
BEST2Q8NFU1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 TSPY21P-201ENST00000433481 731 ntBASIC20.66■□□□□ 0.9
BEST2Q8NFU1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 EGLN1P1-201ENST00000531623 762 ntBASIC20.66■□□□□ 0.9
BEST2Q8NFU1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 KRT18P22-201ENST00000402024 1347 ntBASIC20.66■□□□□ 0.9
BEST2Q8NFU1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms