Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 AC097488.1-201ENST00000507834 756 ntBASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 AC096733.2-201ENST00000609937 1394 ntBASIC18.52■□□□□ 0.55
LINC01555Q8NAE3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC01555Q8NAE3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC01555Q8NAE3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC01555Q8NAE3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC01555Q8NAE3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 MIR1238-201ENST00000408483 83 ntBASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 FITM1-202ENST00000559294 800 ntBASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 SLC25A1P4-201ENST00000567977 778 ntBASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01555Q8NAE3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 KRT8P9-201ENST00000558927 1449 ntBASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 TSPY21P-201ENST00000433481 731 ntBASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 AP005242.2-201ENST00000580065 1175 ntBASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01555Q8NAE3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 AC141586.3-201ENST00000562166 1838 ntBASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 CRYGFP-201ENST00000418459 633 ntBASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 MFAP1P1-201ENST00000442257 1255 ntBASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 CKBP1-201ENST00000565489 1086 ntBASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01555Q8NAE3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms