Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39CQ8N584 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39CQ8N584 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 FAM207BP-201ENST00000447172 505 ntBASIC20.46■□□□□ 0.87
TTC39CQ8N584 AC011506.1-201ENST00000474329 610 ntBASIC20.46■□□□□ 0.87
TTC39CQ8N584 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 AP000692.2-201ENST00000608391 879 ntBASIC20.46■□□□□ 0.87
TTC39CQ8N584 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39CQ8N584 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39CQ8N584 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TTC39CQ8N584 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TTC39CQ8N584 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TTC39CQ8N584 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TTC39CQ8N584 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.45■□□□□ 0.86
TTC39CQ8N584 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39CQ8N584 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.45■□□□□ 0.86
TTC39CQ8N584 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39CQ8N584 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39CQ8N584 MESTP1-201ENST00000404287 994 ntBASIC20.45■□□□□ 0.86
TTC39CQ8N584 SNORA78-201ENST00000459373 127 ntBASIC20.45■□□□□ 0.86
TTC39CQ8N584 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.45■□□□□ 0.86
TTC39CQ8N584 AP003071.4-201ENST00000562276 1284 ntBASIC20.45■□□□□ 0.86
TTC39CQ8N584 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.45■□□□□ 0.86
TTC39CQ8N584 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.45■□□□□ 0.86
TTC39CQ8N584 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.45■□□□□ 0.86
TTC39CQ8N584 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TTC39CQ8N584 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.45■□□□□ 0.86
TTC39CQ8N584 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.44■□□□□ 0.86
TTC39CQ8N584 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TTC39CQ8N584 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TTC39CQ8N584 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.44■□□□□ 0.86
TTC39CQ8N584 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.44■□□□□ 0.86
TTC39CQ8N584 REXO1L10P-201ENST00000615707 1290 ntBASIC20.44■□□□□ 0.86
TTC39CQ8N584 REXO1L12P-201ENST00000622156 912 ntBASIC20.44■□□□□ 0.86
TTC39CQ8N584 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.44■□□□□ 0.86
TTC39CQ8N584 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TTC39CQ8N584 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.44■□□□□ 0.86
TTC39CQ8N584 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39CQ8N584 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39CQ8N584 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39CQ8N584 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39CQ8N584 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 TSPY7P-201ENST00000431358 1114 ntBASIC20.43■□□□□ 0.86
TTC39CQ8N584 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39CQ8N584 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TTC39CQ8N584 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TTC39CQ8N584 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms