Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 AL158211.5-201ENST00000623583 2518 ntBASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB42Q8N4Z0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 FAM197Y1-201ENST00000421178 764 ntBASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB42Q8N4Z0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 AL355355.2-201ENST00000442321 338 ntBASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 MIR4785-201ENST00000585005 73 ntBASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 Z99916.2-201ENST00000604037 246 ntBASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 AC104417.2-201ENST00000562989 1793 ntBASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB42Q8N4Z0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 AC004980.1-204ENST00000429707 299 ntBASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 AC113410.3-201ENST00000623366 203 ntBASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB42Q8N4Z0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB42Q8N4Z0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB42Q8N4Z0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB42Q8N4Z0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB42Q8N4Z0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB42Q8N4Z0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms