Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 KRT8P10-201ENST00000450021 1447 ntBASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 HLA-F-220ENST00000434407 884 ntBASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.15■□□□□ 0.5
COL27A1Q8IZC6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COL27A1Q8IZC6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COL27A1Q8IZC6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 AP002383.4-201ENST00000442518 975 ntBASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL27A1Q8IZC6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 AL391422.3-201ENST00000603791 2761 ntBASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 TPSP2-201ENST00000561760 610 ntBASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 RN7SL510P-201ENST00000581311 263 ntBASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL27A1Q8IZC6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 PVRIG2P-201ENST00000435460 978 ntBASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 AC016734.2-201ENST00000624325 1377 ntBASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COL27A1Q8IZC6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms