Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.02■□□□□ 0.31
LINC00346Q8IVM7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.02■□□□□ 0.31
LINC00346Q8IVM7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LINC00346Q8IVM7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LINC00346Q8IVM7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.02■□□□□ 0.31
LINC00346Q8IVM7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC00346Q8IVM7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC00346Q8IVM7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LINC00346Q8IVM7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00346Q8IVM7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LINC00346Q8IVM7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17■□□□□ 0.31
LINC00346Q8IVM7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17■□□□□ 0.31
LINC00346Q8IVM7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17■□□□□ 0.31
LINC00346Q8IVM7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17■□□□□ 0.31
LINC00346Q8IVM7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17■□□□□ 0.31
LINC00346Q8IVM7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17■□□□□ 0.31
LINC00346Q8IVM7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 PRKY-204ENST00000533551 1019 ntBASIC17■□□□□ 0.31
LINC00346Q8IVM7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 Six3os1_6.1-201ENST00000620790 196 ntBASIC17■□□□□ 0.31
LINC00346Q8IVM7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00346Q8IVM7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LINC00346Q8IVM7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 AP003097.1-201ENST00000530657 1135 ntBASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LINC00346Q8IVM7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms