Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NUDCD3Q8IVD9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD3Q8IVD9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 AC005332.8-201ENST00000622750 2735 ntBASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 KRT17P1-201ENST00000399211 1546 ntBASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD3Q8IVD9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 AC016769.1-201ENST00000409132 1010 ntBASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 AC011767.1-201ENST00000617410 1153 ntBASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD3Q8IVD9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
NUDCD3Q8IVD9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NUDCD3Q8IVD9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUDCD3Q8IVD9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUDCD3Q8IVD9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUDCD3Q8IVD9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUDCD3Q8IVD9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
NUDCD3Q8IVD9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 OR10C1-204ENST00000622521 1039 ntBASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 IRX1P1-201ENST00000438849 1838 ntBASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 BCL2-203ENST00000589955 5011 ntBASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUDCD3Q8IVD9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 AL512353.2-201ENST00000448759 1962 ntBASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUDCD3Q8IVD9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms