Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 AP002383.4-201ENST00000442518 975 ntBASIC19.82■□□□□ 0.76
DENND4AQ7Z401 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 AL732292.2-201ENST00000609649 430 ntBASIC19.82■□□□□ 0.76
DENND4AQ7Z401 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.82■□□□□ 0.76
DENND4AQ7Z401 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 AC079781.3-201ENST00000449110 356 ntBASIC19.81■□□□□ 0.76
DENND4AQ7Z401 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 AC012615.1-201ENST00000565797 1299 ntBASIC19.81■□□□□ 0.76
DENND4AQ7Z401 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 AL121672.3-201ENST00000608644 468 ntBASIC19.81■□□□□ 0.76
DENND4AQ7Z401 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DENND4AQ7Z401 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.8■□□□□ 0.76
DENND4AQ7Z401 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 SEC1P-202ENST00000473944 940 ntBASIC19.8■□□□□ 0.76
DENND4AQ7Z401 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 AC092329.2-201ENST00000598402 547 ntBASIC19.8■□□□□ 0.76
DENND4AQ7Z401 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 AC016734.2-201ENST00000624325 1377 ntBASIC19.8■□□□□ 0.76
DENND4AQ7Z401 AC020907.5-201ENST00000624372 1936 ntBASIC19.8■□□□□ 0.76
DENND4AQ7Z401 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.8■□□□□ 0.76
DENND4AQ7Z401 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 BX276092.5-203ENST00000456199 560 ntBASIC19.79■□□□□ 0.76
DENND4AQ7Z401 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 CHCHD2P8-201ENST00000429873 447 ntBASIC19.79■□□□□ 0.76
DENND4AQ7Z401 AP000347.1-202ENST00000435868 847 ntBASIC19.79■□□□□ 0.76
DENND4AQ7Z401 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.79■□□□□ 0.76
DENND4AQ7Z401 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 HLA-F-220ENST00000434407 884 ntBASIC19.78■□□□□ 0.76
DENND4AQ7Z401 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
DENND4AQ7Z401 GPAT2P1-201ENST00000444924 1672 ntBASIC19.78■□□□□ 0.76
DENND4AQ7Z401 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
DENND4AQ7Z401 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
DENND4AQ7Z401 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DENND4AQ7Z401 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DENND4AQ7Z401 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DENND4AQ7Z401 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.77■□□□□ 0.76
DENND4AQ7Z401 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.77■□□□□ 0.76
DENND4AQ7Z401 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DENND4AQ7Z401 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms