Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF44Q7L0R7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 AC004951.3-201ENST00000418645 1148 ntBASIC18.45■□□□□ 0.54
RNF44Q7L0R7 RBM17P1-201ENST00000453646 1190 ntBASIC18.45■□□□□ 0.54
RNF44Q7L0R7 TSPY15P-201ENST00000457163 923 ntBASIC18.45■□□□□ 0.54
RNF44Q7L0R7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 DGCR10-201ENST00000609839 495 ntBASIC18.45■□□□□ 0.54
RNF44Q7L0R7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF44Q7L0R7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 AC011298.2-201ENST00000617989 482 ntBASIC18.44■□□□□ 0.54
RNF44Q7L0R7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 KRT8P41-201ENST00000533985 1514 ntBASIC18.44■□□□□ 0.54
RNF44Q7L0R7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF44Q7L0R7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 UNC93B2-201ENST00000285383 730 ntBASIC18.43■□□□□ 0.54
RNF44Q7L0R7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 AC130371.2-201ENST00000619443 611 ntBASIC18.43■□□□□ 0.54
RNF44Q7L0R7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 AFG3L1P-217ENST00000557444 2447 ntBASIC18.43■□□□□ 0.54
RNF44Q7L0R7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF44Q7L0R7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 AC008040.2-201ENST00000461049 708 ntBASIC18.42■□□□□ 0.54
RNF44Q7L0R7 AC091390.4-202ENST00000476426 537 ntBASIC18.42■□□□□ 0.54
RNF44Q7L0R7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 BX088651.1-201ENST00000540551 451 ntBASIC18.42■□□□□ 0.54
RNF44Q7L0R7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.42■□□□□ 0.54
RNF44Q7L0R7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms