Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PACS1Q6VY07 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.42■□□□□ 0.7
PACS1Q6VY07 LETM1P2-201ENST00000597330 2178 ntBASIC19.42■□□□□ 0.7
PACS1Q6VY07 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 PRKY-204ENST00000533551 1019 ntBASIC19.41■□□□□ 0.7
PACS1Q6VY07 AC233263.1-201ENST00000578059 224 ntBASIC19.41■□□□□ 0.7
PACS1Q6VY07 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PACS1Q6VY07 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PACS1Q6VY07 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 AC006058.3-201ENST00000606217 1069 ntBASIC19.4■□□□□ 0.7
PACS1Q6VY07 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 AC006333.2-201ENST00000607957 2099 ntBASIC19.4■□□□□ 0.7
PACS1Q6VY07 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PACS1Q6VY07 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.4■□□□□ 0.7
PACS1Q6VY07 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PACS1Q6VY07 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PACS1Q6VY07 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PACS1Q6VY07 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PACS1Q6VY07 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PACS1Q6VY07 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PACS1Q6VY07 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PACS1Q6VY07 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 AC073648.6-201ENST00000641589 218 ntBASIC19.39■□□□□ 0.69
PACS1Q6VY07 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.39■□□□□ 0.69
PACS1Q6VY07 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PACS1Q6VY07 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PACS1Q6VY07 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PACS1Q6VY07 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PACS1Q6VY07 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PACS1Q6VY07 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PACS1Q6VY07 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PACS1Q6VY07 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PACS1Q6VY07 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms