Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNKSR3Q6P9H4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNKSR3Q6P9H4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.71■□□□□ 0.91
CNKSR3Q6P9H4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.71■□□□□ 0.91
CNKSR3Q6P9H4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.71■□□□□ 0.91
CNKSR3Q6P9H4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CNKSR3Q6P9H4 LINC00565-201ENST00000562710 2331 ntBASIC20.71■□□□□ 0.91
CNKSR3Q6P9H4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 AC111152.3-201ENST00000569699 673 ntBASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNKSR3Q6P9H4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 AC016734.2-201ENST00000624325 1377 ntBASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 AC104417.2-201ENST00000562989 1793 ntBASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNKSR3Q6P9H4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 AP005212.1-201ENST00000581547 1997 ntBASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 AC004870.1-201ENST00000315132 882 ntBASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 MIR3180-1-201ENST00000580374 94 ntBASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 MIR3180-3-201ENST00000584616 94 ntBASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 AC024243.1-201ENST00000609234 778 ntBASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.68■□□□□ 0.9
CNKSR3Q6P9H4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 GPAT2P1-201ENST00000444924 1672 ntBASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNKSR3Q6P9H4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms