Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 TSPY21P-201ENST00000433481 731 ntBASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 TSPY23P-201ENST00000440136 739 ntBASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD4Q5XG99 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
LYSMD4Q5XG99 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 TSSC2-201ENST00000450217 709 ntBASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 AC092597.1-201ENST00000487352 616 ntBASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.86■□□□□ 0.61
LYSMD4Q5XG99 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 BX276092.5-203ENST00000456199 560 ntBASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 AC111152.3-201ENST00000569699 673 ntBASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 RN7SL510P-201ENST00000581311 263 ntBASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 AL121672.3-201ENST00000608644 468 ntBASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LYSMD4Q5XG99 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 AC246785.2-201ENST00000432512 513 ntBASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 AC011498.5-201ENST00000592027 486 ntBASIC18.84■□□□□ 0.61
LYSMD4Q5XG99 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms