Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 PVRIG2P-201ENST00000435460 978 ntBASIC24.26■■□□□ 1.47
RC3H1Q5TC82 KRT8P26-201ENST00000534154 1276 ntBASIC24.26■■□□□ 1.47
RC3H1Q5TC82 AC024243.1-201ENST00000609234 778 ntBASIC24.26■■□□□ 1.47
RC3H1Q5TC82 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 GPAT2P1-201ENST00000444924 1672 ntBASIC24.26■■□□□ 1.47
RC3H1Q5TC82 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RC3H1Q5TC82 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 PPIH-202ENST00000372549 327 ntTSL 3 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 HLA-F-220ENST00000434407 884 ntBASIC24.25■■□□□ 1.47
RC3H1Q5TC82 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 MPI-205ENST00000562606 1052 ntTSL 3 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 KRT8P10-201ENST00000450021 1447 ntBASIC24.25■■□□□ 1.47
RC3H1Q5TC82 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RC3H1Q5TC82 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.24■■□□□ 1.47
RC3H1Q5TC82 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 AL023284.2-201ENST00000405850 579 ntBASIC24.23■■□□□ 1.47
RC3H1Q5TC82 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 AP002414.4-201ENST00000589764 1148 ntBASIC24.23■■□□□ 1.47
RC3H1Q5TC82 AC079602.3-201ENST00000623931 403 ntBASIC24.23■■□□□ 1.47
RC3H1Q5TC82 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 AL162741.1-201ENST00000565563 1558 ntBASIC24.23■■□□□ 1.47
RC3H1Q5TC82 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 AC093525.10-201ENST00000625130 1569 ntBASIC24.23■■□□□ 1.47
RC3H1Q5TC82 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RC3H1Q5TC82 AP005212.1-201ENST00000581547 1997 ntBASIC24.23■■□□□ 1.47
RC3H1Q5TC82 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RC3H1Q5TC82 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms