Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 RNA5SP415-201ENST00000517246 115 ntBASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 AC005332.3-201ENST00000589904 676 ntBASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.71■■□□□ 1.07
COL13A1Q5TAT6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
COL13A1Q5TAT6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL13A1Q5TAT6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 AC009533.2-201ENST00000543664 586 ntBASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 AC005829.1-201ENST00000570002 483 ntBASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 AL157888.1-201ENST00000631930 593 ntBASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL13A1Q5TAT6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 CNN2P11-201ENST00000429351 262 ntBASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 AC005225.4-201ENST00000557330 545 ntBASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 AL160286.2-201ENST00000567150 934 ntBASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 AC018553.1-201ENST00000616682 1458 ntBASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL13A1Q5TAT6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 AC092910.1-201ENST00000482027 1129 ntBASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 AC091607.1-201ENST00000490318 1060 ntBASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 MIR5100-201ENST00000579544 119 ntBASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 MIR4469-201ENST00000583919 79 ntBASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.68■■□□□ 1.06
COL13A1Q5TAT6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 KRT8P17-201ENST00000453110 1448 ntBASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 AC007967.2-201ENST00000432613 625 ntBASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 AC132008.2-207ENST00000454517 770 ntBASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 MINOS1P3-201ENST00000457048 203 ntBASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 YBX1P5-201ENST00000509441 847 ntBASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.67■■□□□ 1.06
COL13A1Q5TAT6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL13A1Q5TAT6 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms