Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 LINC01311-201ENST00000565162 1445 ntBASIC21■□□□□ 0.95
TRIM71Q2Q1W2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM71Q2Q1W2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 CLEC4GP1-201ENST00000596555 870 ntBASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM71Q2Q1W2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 TSPY23P-201ENST00000440136 739 ntBASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRIM71Q2Q1W2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 AL450487.1-201ENST00000426799 995 ntBASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM71Q2Q1W2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM71Q2Q1W2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms