Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CAQ08209 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CAQ08209 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CAQ08209 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 IRX1P1-201ENST00000438849 1838 ntBASIC20.78■□□□□ 0.92
PPP3CAQ08209 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CAQ08209 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CAQ08209 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CAQ08209 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 KRT16P1-201ENST00000399124 1418 ntBASIC20.78■□□□□ 0.92
PPP3CAQ08209 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP3CAQ08209 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.78■□□□□ 0.92
PPP3CAQ08209 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 RPS2P55-201ENST00000397318 883 ntBASIC20.77■□□□□ 0.92
PPP3CAQ08209 AC107956.1-201ENST00000494359 873 ntBASIC20.77■□□□□ 0.92
PPP3CAQ08209 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 AC131212.4-201ENST00000623606 975 ntBASIC20.77■□□□□ 0.92
PPP3CAQ08209 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.77■□□□□ 0.92
PPP3CAQ08209 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPP3CAQ08209 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.77■□□□□ 0.91
PPP3CAQ08209 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PPP3CAQ08209 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 FAM197Y1-201ENST00000421178 764 ntBASIC20.76■□□□□ 0.91
PPP3CAQ08209 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 TSPY23P-201ENST00000440136 739 ntBASIC20.76■□□□□ 0.91
PPP3CAQ08209 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 Z99916.2-201ENST00000604037 246 ntBASIC20.76■□□□□ 0.91
PPP3CAQ08209 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.76■□□□□ 0.91
PPP3CAQ08209 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP3CAQ08209 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CAQ08209 BX323043.1-201ENST00000641006 1765 ntBASIC20.75■□□□□ 0.91
PPP3CAQ08209 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PPP3CAQ08209 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PPP3CAQ08209 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.75■□□□□ 0.91
PPP3CAQ08209 AC008040.2-201ENST00000461049 708 ntBASIC20.75■□□□□ 0.91
PPP3CAQ08209 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.75■□□□□ 0.91
PPP3CAQ08209 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CAQ08209 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CAQ08209 AL135905.2-201ENST00000584934 1404 ntBASIC20.75■□□□□ 0.91
PPP3CAQ08209 FP475955.4-201ENST00000623131 1990 ntBASIC20.75■□□□□ 0.91
PPP3CAQ08209 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PPP3CAQ08209 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CAQ08209 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP3CAQ08209 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
PPP3CAQ08209 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PPP3CAQ08209 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.74■□□□□ 0.91
PPP3CAQ08209 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.74■□□□□ 0.91
PPP3CAQ08209 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.74■□□□□ 0.91
PPP3CAQ08209 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.74■□□□□ 0.91
PPP3CAQ08209 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.74■□□□□ 0.91
PPP3CAQ08209 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPP3CAQ08209 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms