Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL1Q00532 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CDKL1Q00532 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL1Q00532 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL1Q00532 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDKL1Q00532 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDKL1Q00532 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL1Q00532 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDKL1Q00532 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL1Q00532 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDKL1Q00532 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL1Q00532 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.9■□□□□ 0.62
CDKL1Q00532 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.9■□□□□ 0.62
CDKL1Q00532 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDKL1Q00532 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 AC104417.2-201ENST00000562989 1793 ntBASIC18.9■□□□□ 0.62
CDKL1Q00532 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 NBPF21P-201ENST00000425093 1451 ntBASIC18.9■□□□□ 0.62
CDKL1Q00532 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL1Q00532 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL1Q00532 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CDKL1Q00532 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CDKL1Q00532 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CDKL1Q00532 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.89■□□□□ 0.62
CDKL1Q00532 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.89■□□□□ 0.62
CDKL1Q00532 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDKL1Q00532 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDKL1Q00532 AL049812.1-201ENST00000432563 2267 ntBASIC18.89■□□□□ 0.61
CDKL1Q00532 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.89■□□□□ 0.61
CDKL1Q00532 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKL1Q00532 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.89■□□□□ 0.61
CDKL1Q00532 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.89■□□□□ 0.61
CDKL1Q00532 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDKL1Q00532 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.89■□□□□ 0.61
CDKL1Q00532 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL1Q00532 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDKL1Q00532 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CDKL1Q00532 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKL1Q00532 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDKL1Q00532 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKL1Q00532 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
CDKL1Q00532 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.89■□□□□ 0.61
CDKL1Q00532 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL1Q00532 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDKL1Q00532 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL1Q00532 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL1Q00532 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL1Q00532 ESRRAP1-201ENST00000400596 1257 ntBASIC18.88■□□□□ 0.61
CDKL1Q00532 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKL1Q00532 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKL1Q00532 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKL1Q00532 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL1Q00532 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL1Q00532 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL1Q00532 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDKL1Q00532 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKL1Q00532 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CDKL1Q00532 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL1Q00532 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKL1Q00532 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKL1Q00532 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDKL1Q00532 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.87■□□□□ 0.61
CDKL1Q00532 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL1Q00532 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL1Q00532 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL1Q00532 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms